D. Ettehad, H. S. Schaaf, J. A. Seddon, G. S. Cooke, and N. Ford, Treatment outcomes for children with multidrug-resistant tuberculosis: a systematic review and meta-analysis, The Lancet Infectious Diseases, vol.12, issue.6, pp.449-456, 2012.
DOI : 10.1016/S1473-3099(12)70033-6

J. C. Johnston, N. C. Shahidi, M. Sadatsafavi, and J. M. Fitzgerald, Treatment Outcomes of Multidrug-Resistant Tuberculosis: A Systematic Review and Meta-Analysis, PLoS ONE, vol.9, issue.22, 2009.
DOI : 10.1371/journal.pone.0006914.t003

D. Antoine and D. Che, Les cas de tuberculose déclarés en France en 2010, BulletinÉpidémiologiqueBulletin´BulletinÉpidémiologique Hebdomadaire, pp.24-25, 2012.

J. Kamerbeek, L. Schouls, and A. Kolk, Simultaneous detection and strain differentiation of Mycobacterium tuberculosis for diagnosis and epidemiology, Journal of Clinical Microbiology, vol.35, issue.4, pp.907-914, 1997.

P. Supply, S. Lesjean, E. Savine, K. Kremer, D. Van-soolingen et al., Automated High-Throughput Genotyping for Study of Global Epidemiology of Mycobacterium tuberculosis Based on Mycobacterial Interspersed Repetitive Units, Journal of Clinical Microbiology, vol.39, issue.10, pp.3563-3571, 2001.
DOI : 10.1128/JCM.39.10.3563-3571.2001

K. Brudey, J. R. Driscoll, and L. Rigouts, Mycobacterium tuberculosis complex genetic diversity: mining the fourth international spoligotyping database (SpolDB4) for classification, population genetics and epidemiology, BMC Microbiology, vol.6, issue.23, 2006.

C. Demay, B. Liens, and T. Burguì-ere, SITVITWEB ??? A publicly available international multimarker database for studying Mycobacterium tuberculosis genetic diversity and molecular epidemiology, Infection, Genetics and Evolution, vol.12, issue.4, pp.755-766, 2012.
DOI : 10.1016/j.meegid.2012.02.004
URL : https://hal.archives-ouvertes.fr/pasteur-00691750

A. Van-deun, A. Wright, M. Zignol, K. Weyer, and H. L. Rieder, Drug susceptibility testing proficiency in the network of supranational tuberculosis reference laboratories, International Journal of Tuberculosis and Lung Disease, vol.15, issue.1, pp.116-124, 2011.

N. Rastogi, K. S. Goh, and H. L. David, Drug susceptibility testing in tuberculosis: A comparison of the proportion methods using Lowenstein-Jensen, middlebrook 7H10 and 7H11 agar media and a radiometric method, Research in Microbiology, vol.140, issue.5, pp.405-417, 1989.
DOI : 10.1016/0923-2508(89)90016-8

F. Ardito, B. Posteraro, M. Sanguinetti, S. Zanetti, and G. Fadda, Evaluation of BACTEC Mycobacteria Growth Indicator Tube (MGIT 960) Automated System for Drug Susceptibility Testing of Mycobacterium tuberculosis, Journal of Clinical Microbiology, vol.39, issue.12, pp.4440-4444, 2001.
DOI : 10.1128/JCM.39.12.4440-4444.2001

H. Kim, M. Seo, and Y. K. Park, Evaluation of MGIT 960 system for the second-line drugs susceptibility testing of Mycobacterium tuberculosis, Tuberculosis Research and Treatment, vol.2013, 2013.

S. Mironova, E. Pimkina, and I. Kontsevaya, Performance of the GenoType?? MTBDRPlus assay in routine settings: a multicenter study, European Journal of Clinical Microbiology & Infectious Diseases, vol.33, issue.2, pp.1381-1387, 2012.
DOI : 10.1007/s10096-011-1453-1

I. Baussano, M. Bugiani, and D. Gregori, Undetected burden of tuberculosis in a low-prevalence area, International Journal of Tuberculosis and Lung Disease, vol.10, issue.4, pp.415-421, 2006.

D. Antoine and D. Che, Les cas de tuberculose déclarés en France en, BulletinÉpidémiologiqueBulletin´BulletinÉpidémiologique Hebdomadaire, vol.11, pp.85-89, 2005.

D. Che and D. Bitar, Les cas de tuberculose déclarés en France en, BulletinÉpidémiologiqueBulletin´BulletinÉpidémiologique Hebdomadaire, vol.17, issue.18, pp.65-84, 2003.

B. Decludt and C. Campese, Les cas de tuberculose déclarés en France en Epidémiologie de la Tuberculose en France?Données, Institut de Veille Sanitaire, pp.41-43, 1998.

G. Cadelis, E. Rossigneux, J. Millet, and N. Rastogi, ??tude ??pidemiologique comparative de la tuberculose des sujets migrants et natifs en Guadeloupe de 2006???? 2011, Revue des Maladies Respiratoires, vol.29, issue.7, pp.858-870, 2006.
DOI : 10.1016/j.rmr.2012.05.003

N. Veziris, V. Jarlier, and J. Robert, La résistance aux antituberculeux en France en, BulletinÉpidemiologiqueBulletin´BulletinÉpidemiologique Hebdomadair, pp.24-25, 2009.

J. A. Caminero, Multidrug-resistant tuberculosis: epidemiology , risk factors and case finding, International Journal of Tuberculosis and Lung Disease, vol.14, issue.4, pp.382-390, 2010.

D. Che and D. Antoine, ??pid??miologie de la tuberculose en France en 2008, M??decine et Maladies Infectieuses, vol.41, issue.7, pp.372-378, 2008.
DOI : 10.1016/j.medmal.2010.12.020

Y. Zhao, S. Xu, and L. Wang, National Survey of Drug-Resistant Tuberculosis in China, New England Journal of Medicine, vol.366, issue.23, pp.2161-2170, 2012.
DOI : 10.1056/NEJMoa1108789

J. Millet, W. Laurent, T. Zozio, and N. Rastogi, Finer Snapshot of Circulating Mycobacterium tuberculosis Genotypes in Guadeloupe, Martinique, and French Guiana, Journal of Clinical Microbiology, vol.49, issue.7, pp.2685-2687, 2011.
DOI : 10.1128/JCM.00708-11
URL : https://hal.archives-ouvertes.fr/pasteur-00691760

. Groupe-de-travail-du-conseil-supérieur-dhygì-ene-publique-de-france, Traitement de la tuberculose-maladie, Médecine Et Maladies Infectieuses, vol.34, pp.375-381, 2004.

Y. Zhang and W. W. Yew, Mechanisms of Drug Resistance in Mycobacterium tuberculosis, International Journal of Tuberculosis and Lung Disease, vol.13, issue.11, pp.1320-1330, 2009.
DOI : 10.1128/9781555817657.ch8

V. Kapur, L. Li, and S. Iordanescu, Characterization by automated DNA sequencing of mutations in the gene (rpoB) encoding the RNA polymerase í µí»½ subunit in rifampin-resistant Mycobacterium tuberculosis strains from New York City and Texas, Journal of Clinical Microbiology, vol.32, issue.4, pp.1095-1098, 1994.

N. Siddiqi, M. Shamim, and S. Hussain, Molecular Characterization of Multidrug-Resistant Isolates of Mycobacterium tuberculosis from Patients in North India, Antimicrobial Agents and Chemotherapy, vol.46, issue.2, pp.443-450, 2002.
DOI : 10.1128/AAC.46.2.443-450.2002

A. Sajduda, A. Brzostek, and M. Pop?awska, Molecular Characterization of Rifampin- and Isoniazid-Resistant Mycobacterium tuberculosis Strains Isolated in Poland, Journal of Clinical Microbiology, vol.42, issue.6, pp.2425-2431, 2004.
DOI : 10.1128/JCM.42.6.2425-2431.2004

R. Zenteno-cuevas, J. C. Zenteno, and A. Cuellar, Mutations in rpoB and katG genes in Mycobacterium isolates from the Southeast of Mexico, Memórias do Instituto Oswaldo Cruz, pp.468-472, 2009.
DOI : 10.1590/S0074-02762009000300012

F. Cazein, R. Pinget, and F. Lot, Découvertes de séropositivité VIH et sida?France, BulletinÉpidémiologiqueBulletin´BulletinÉpidémiologique Hebdomadaire, pp.43-44, 2003.

R. Ouissa, S. Daval, and G. Hurtrel, ´ Evolution comparée du profil des patients infectés par le VIH1 nouvellement diagnostiqués (PND) aux Antilles Françaises entre, Médecine et Maladies Infectieuses, p.14, 2001.

S. Borrell and S. Gagneux, Infectiousness, reproductive fitness and evolution of drug-resistant Mycobacterium tuberculosis, International Journal of Tuberculosis and Lung Disease, vol.13, issue.12, pp.1456-1466, 2009.

S. Gagneux and P. M. Small, Global phylogeography of Mycobacterium tuberculosis and implications for tuberculosis product development, The Lancet Infectious Diseases, vol.7, issue.5, pp.328-337, 2007.
DOI : 10.1016/S1473-3099(07)70108-1

I. Parwati, R. Van-crevel, and D. Van-soolingen, Possible underlying mechanisms for successful emergence of the Mycobacterium tuberculosis Beijing genotype strains, The Lancet Infectious Diseases, vol.10, issue.2, pp.103-111, 2010.
DOI : 10.1016/S1473-3099(09)70330-5

K. Brudey, I. Filliol, and S. Ferdinand, Long-Term Population-Based Genotyping Study of Mycobacterium tuberculosis Complex Isolates in the French Departments of the Americas, Journal of Clinical Microbiology, vol.44, issue.1, pp.183-191, 2006.
DOI : 10.1128/JCM.44.1.183-191.2006

U. Bidovec-stojkovic, M. Zolnir-dovc, and P. Supply, One year nationwide evaluation of 24-locus MIRU-VNTR genotyping on Slovenian Mycobacterium tuberculosis isolates, Respiratory Medicine, vol.105, pp.67-73, 2011.
DOI : 10.1016/S0954-6111(11)70014-2

M. C. Oelemann, R. Diel, and V. Vatin, Assessment of an Optimized Mycobacterial Interspersed Repetitive- Unit-Variable-Number Tandem-Repeat Typing System Combined with Spoligotyping for Population-Based Molecular Epidemiology Studies of Tuberculosis, Journal of Clinical Microbiology, vol.45, issue.3, pp.691-697, 2007.
DOI : 10.1128/JCM.01393-06

E. Abadía, M. Sequera, and D. Ortega, Mycobacterium tuberculosis ecology in Venezuela: epidemiologic correlates of common spoligotypes and a large clonal cluster defined by MIRU-VNTR-24, BMC Infectious Diseases, vol.46, issue.8, 2009.
DOI : 10.1128/JCM.00540-08

S. A. Vinhas, M. Palaci, and H. S. Marques, Mycobacterium tuberculosis DNA fingerprint clusters and its relationship with RDRio genotype in Brazil, Tuberculosis, vol.93, issue.2, pp.207-212, 2013.
DOI : 10.1016/j.tube.2012.09.001

M. A. Espinal, J. Báez, and G. Soriano, Drug-resistant tuberculosis in the Dominican Republic: results of a nationwide survey, International Journal of Tuberculosis and Lung Disease, vol.2, issue.6, pp.490-498, 1998.

E. D. Matos, A. C. Lemos, C. Bittencourt, and C. L. Mesquita, Anti-tuberculosis drug resistance in strains of Mycobacterium tuberculosis isolated from patients in a tertiary hospital in Bahia, Brazilian Journal of Infectious Diseases, vol.11, issue.3, pp.331-338, 2007.
DOI : 10.1590/S1413-86702007000300007

N. Menner, I. Günther, and H. Orawa, High frequency of multidrug-resistant Mycobacterium tuberculosis isolates in Georgetown, Guyana, Tropical Medicine & International Health, vol.109, issue.12, pp.1215-1218, 2005.
DOI : 10.1111/j.1365-3156.2005.01521.x

O. Ocheretina, W. Morose, and M. Gauthier, Multidrug-resistant tuberculosis in Port-au-Prince, Haiti, Revista Panamericana de Salud P??blica, vol.31, issue.3, pp.221-224, 2012.
DOI : 10.1590/S1020-49892012000300006
URL : https://hal.archives-ouvertes.fr/pasteur-00708382