C. Jonsson, L. Figueiredo, and O. Vapalahti, A Global Perspective on Hantavirus Ecology, Epidemiology, and Disease, Clinical Microbiology Reviews, vol.23, issue.2, pp.412-441, 2010.
DOI : 10.1128/CMR.00062-09

L. Allen, R. Mccormack, and C. Jonsson, Mathematical Models for Hantavirus Infection in Rodents, Bulletin of Mathematical Biology, vol.65, issue.011912, pp.511-524, 2006.
DOI : 10.1007/s11538-005-9034-4

F. Sauvage, M. Langlais, and D. Pontier, Predicting the emergence of human hantavirus disease using a combination of viral dynamics and rodent demographic patterns, Epidemiology and Infection, vol.135, issue.01, pp.46-56, 2007.
DOI : 10.1017/S0950268806006595
URL : https://hal.archives-ouvertes.fr/hal-00195448

J. , R. D. Salazar, M. Ksiazek, and T. , Hantavirus pulmonary syndrome in central Bolivia: relationships between reservoir hosts, habitats, and viral genotypes, Am J Trop Med Hyg, vol.72, pp.42-46, 2005.

J. Mills, K. Schmidt, B. Ellis, G. Calderó-n, D. Enria et al., A Longitudinal Study of Hantavirus Infection in Three Sympatric Reservoir Species in Agroecosystems on the Argentine Pampa, Vector-Borne and Zoonotic Diseases, vol.7, issue.2, pp.229-240, 2007.
DOI : 10.1089/vbz.2006.0614

B. Patterson, Accumulating Knowledge on the Dimensions of Biodiversity: Systematic Perspectives on Neotropical Mammals, Biodiversity Letters, vol.2, issue.3, pp.79-86, 1994.
DOI : 10.2307/2999761

E. Rosa, J. Mills, P. Padula, M. Elkhoury, T. Ksiazek et al., Newly Recognized Hantaviruses Associated with Hantavirus Pulmonary Syndrome in Northern Brazil: Partial Genetic Characterization of Viruses and Serologic Implication of Likely Reservoirs, Vector-Borne and Zoonotic Diseases, vol.5, issue.1, pp.11-19, 2005.
DOI : 10.1089/vbz.2005.5.11

D. Medeiros, E. Da-rosa, A. Marques, D. Simith, A. Carnero et al., Circulation of hantaviruses in the influence area of the Cuiab??-Santar??m Highway, Mem??rias do Instituto Oswaldo Cruz, vol.105, issue.5, pp.665-671, 2010.
DOI : 10.1590/S0074-02762010000500011

T. Da-rosa, E. Medeiros, D. Nunes, M. Simith, D. De-souza-pereira et al., Pygmy Rice Rat as Potential Host of Castelo dos Sonhos Hantavirus, Emerging Infectious Diseases, vol.17, issue.8, pp.1527-1530, 2011.
DOI : 10.3201/eid1708.101547

C. Firth, A. Tokarz, D. Simith, M. Nunes, M. Bhat et al., Diversity and Distribution of Hantaviruses in South America, Journal of Virology, vol.86, issue.24, pp.13756-13766, 2012.
DOI : 10.1128/JVI.02341-12

S. Matheus, F. Djossou, D. Moua, A. Bourbigot, D. Hommel et al., Hantavirus Pulmonary Syndrome, French Guiana, Emerging Infectious Diseases, vol.16, issue.4, pp.739-741, 2010.
DOI : 10.3201/eid1604.090831
URL : https://hal.archives-ouvertes.fr/pasteur-00583873

B. Lim, Preliminary Assessment of Neotropical Mammal DNA Barcodes: An Underestimation of Biodiversity, The Open Zoology Journal, vol.5, issue.1, pp.10-17
DOI : 10.2174/1874336601205010010

A. Johnson, M. Bowen, T. Ksiazek, R. Williams, R. Bryan et al., Laguna Negra Virus Associated with HPS in Western Paraguay and Bolivia, Virology, vol.238, issue.1, pp.115-127, 1997.
DOI : 10.1006/viro.1997.8840

K. Tamura, D. Peterson, N. Peterson, G. Stecher, M. Nei et al., MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods, Molecular Biology and Evolution, vol.28, issue.10, pp.2731-2739, 2011.
DOI : 10.1093/molbev/msr121
URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3203626

J. Nylander, MrModeltest v2, Evolutionary Biology Centre, 2004.

F. Ronquist and J. Huelsenbeck, MrBayes 3: Bayesian phylogenetic inference under mixed models, Bioinformatics, vol.19, issue.12, pp.1572-1574, 2003.
DOI : 10.1093/bioinformatics/btg180
URL : http://bioinformatics.oxfordjournals.org/cgi/content/short/19/12/1572

S. Matheus, A. Lavergne, B. De-thoisy, P. Dussart, and V. Lacoste, Complete Genome Sequence of a Novel Hantavirus Variant of Rio Mamore Virus, Maripa Virus, from French Guiana, Journal of Virology, vol.86, issue.9, p.5399, 2012.
DOI : 10.1128/JVI.00337-12
URL : https://hal.archives-ouvertes.fr/pasteur-00752355

A. Billings, P. Rollin, M. Milazzo, C. Molina, E. Eyzaguirre et al., ), Vector-Borne and Zoonotic Diseases, vol.10, issue.6, pp.621-628, 2010.
DOI : 10.1089/vbz.2009.0156

J. Boone, E. Otteson, K. Mcgwire, P. Villard, J. Rowe et al., Ecology and demographics of hantavirus infections in rodent populations in the Walker River Basin of Nevada and California, Am J Trop Med Hyg, vol.59, pp.445-451, 1998.

M. Vincent, E. Quiroz, F. Gracia, A. Sanchez, T. Ksiazek et al., Hantavirus Pulmonary Syndrome in Panama: Identification of Novel Hantaviruses and Their Likely Reservoirs, Virology, vol.277, issue.1, pp.14-19, 2000.
DOI : 10.1006/viro.2000.0563

G. Suzan, J. Giermakowski, E. Marce, H. Suzan-azpiri, B. Armié-n et al., Modeling hantavirus reservoir species dominance in high seroprevalence areas on the Azuero Peninsula of Panama, Am J Trop Med Hyg, vol.74, pp.1103-1110, 2006.

Y. Chu, D. Goodin, R. Owen, D. Koch, and C. Jonsson, Sympatry of 2 Hantavirus Strains, Paraguay, 2003???2007, Emerging Infectious Diseases, vol.15, issue.12, pp.1977-1980, 2003.
DOI : 10.3201/eid1512.090338

M. Milazzo, M. Cajimat, J. Hanson, R. Bradley, M. Quintana et al., Catacamas virus, a hantaviral species naturally associated with Oryzomys couesi (Coues' oryzomys) in Honduras, Am J Trop Med Hyg, vol.75, pp.1003-1010, 2006.

S. Raboni, F. Hoffmann, R. Oliveira, B. Teixeira, C. Bonvincino et al., Phylogenetic characterization of hantaviruses from wild rodents and hantavirus pulmonary syndrome cases in the state of Parana (southern Brazil), Journal of General Virology, vol.90, issue.9, 2009.
DOI : 10.1099/vir.0.011585-0

M. Wisz, R. Hijmans, R. Li, A. Peterson, C. Graham et al., Effects of sample size on the performance of species distribution models, Diversity and Distributions, vol.34, issue.5, pp.763-773, 2008.
DOI : 10.1111/j.1472-4642.2008.00482.x

S. Phillips, R. Anderson, and R. Schapire, Maximum entropy modeling of species geographic distributions, Ecological Modelling, vol.190, issue.3-4, pp.231-259, 2006.
DOI : 10.1016/j.ecolmodel.2005.03.026

R. Voss, An introduction to the Neotropical muroid rodent genus Zygodontomys, Am Mus Nat Hist, vol.210, pp.1-113, 1991.

V. Gond, V. Freycon, J. Molino, O. Brunaux, F. Ingrassia et al., Broad-scale spatial pattern of forest landscape types in the Guiana Shield, International Journal of Applied Earth Observation and Geoinformation, vol.13, issue.3, pp.357-367, 2011.
DOI : 10.1016/j.jag.2011.01.004
URL : https://hal.archives-ouvertes.fr/halsde-00676329

S. Guitet, J. Cornu, O. Brunaux, J. Betbeder, J. Carozza et al., Landform and landscape mapping, French Guiana (South America), Journal of Maps, vol.27, issue.2, 2013.
DOI : 10.1080/17445647.2013.785371
URL : https://hal.archives-ouvertes.fr/hal-01268197

B. De-thoisy, C. Richard-hansen, B. Goguillon, P. Joubert, J. Obstancias et al., Rapid evaluation of threats to biodiversity: human footprint score and large vertebrate species responses in French Guiana, Biodiversity and Conservation, vol.3, issue.6, pp.1567-1584, 2010.
DOI : 10.1007/s10531-010-9787-z

M. Dudík, R. Schapire, and S. Phillips, Correcting sample selection bias in maximum entropy density estimation, Adv Neural Inf Process Syst, vol.18, pp.323-330, 2005.

N. Raes and . Ter-steege, A null-model for significance testing of presence-only species distribution models, Ecography, vol.11, issue.5, pp.727-736, 2007.
DOI : 10.1111/j.2007.0906-7590.05041.x

D. Wilson and D. Reeder, Mammal Species of the World. A Taxonomic and Geographic Reference, 2005.