Issue 1 e00075-15 msphere.asm.org 13 REFERENCES 1 Pantoea agglomerans septicemia in three newborn infants, Pediatr Infect Dis J, vol.1, issue.26, pp.453-454, 2007. ,
Pantoea agglomerans pneumonia in a heart-lung transplant recipient: case report and a review of an emerging pathogen in immunocompromised hosts, Transplant Infectious Disease, vol.300, issue.(16), pp.536-539, 2011. ,
DOI : 10.1111/j.1399-3062.2011.00630.x
Sporadic Pantoea agglomerans bacteremia in a near-term female: case report and review of literature, Jpn J Infect Dis, vol.63, pp.290-291, 2010. ,
Bacteremia caused by Pantoea agglomerans at a medical center in Taiwan, 2000???2010, Journal of Microbiology, Immunology and Infection, vol.46, issue.3, pp.187-194, 2000. ,
DOI : 10.1016/j.jmii.2012.05.005
Pantoea agglomerans, a Plant Pathogen Causing Human Disease, Journal of Clinical Microbiology, vol.45, issue.6, pp.632-639, 1989. ,
DOI : 10.1128/JCM.00632-07
Isolation of Pantoea agglomerans in two cases of septic monoarthritis after plant thorn and wood sliver injuries, J Clin Microbiol, vol.38, pp.460-461, 2000. ,
An outbreak of Pantoea spp. in a neonatal intensive care unit secondary to contaminated parenteral nutrition, Journal of Hospital Infection, vol.61, issue.3, pp.213-218, 2005. ,
DOI : 10.1016/j.jhin.2005.01.004
: an unconventional plant pathogen, Molecular Plant Pathology, vol.40, issue.3, pp.325-335, 2009. ,
DOI : 10.1111/j.1364-3703.2009.00542.x
insights into a highly versatile and diverse genus within the Enterobacteriaceae, FEMS Microbiology Reviews, vol.39, issue.6, pp.968-984, 2015. ,
DOI : 10.1093/femsre/fuv027
Bacterial fruitlet brown rot on pineapple in the Philippines, Philipp J Sci, vol.36, pp.271-305, 1928. ,
Polyphasic study of plant- and clinic-associated Pantoea agglomerans strains reveals indistinguishable virulence potential, Infection, Genetics and Evolution, vol.9, issue.6, pp.1381-1391, 2009. ,
DOI : 10.1016/j.meegid.2009.09.016
Quantitative evaluation of the host-colonizing capabilities of the enteric bacterium Pantoea using plant and insect hosts, Microbiology, vol.160, issue.Pt_3, pp.602-615, 2014. ,
DOI : 10.1099/mic.0.073452-0
Insights into crosskingdom plant pathogenic bacteria, Genes (Basel), vol.2, pp.980-997, 2011. ,
Insects as alternative hosts for phytopathogenic bacteria, FEMS Microbiology Reviews, vol.35, issue.3, pp.555-575, 2011. ,
DOI : 10.1111/j.1574-6976.2011.00264.x
enables gut colonization and pathogenicity in an insect host, Environmental Microbiology, vol.175, issue.1, pp.147-155, 2010. ,
DOI : 10.1111/j.1462-2920.2009.02056.x
Analysis of the Pantoea ananatis pan-genome reveals factors underlying its ability to colonize and interact with plant, insect and vertebrate hosts, BMC Genomics, vol.15, issue.1, pp.4041471-2164, 2014. ,
DOI : 10.1128/JB.187.18.6258-6264.2005
Comparative genomics of type VI secretion systems in strains of Pantoea ananatis from different environments, BMC Genomics, vol.15, issue.1, p.163, 2014. ,
DOI : 10.1093/nar/28.1.33
Host specificity determinants as a genetic continuum, Trends in Microbiology, vol.20, issue.2, pp.88-93, 2012. ,
DOI : 10.1016/j.tim.2011.11.006
Inheritance of Pantoea type III secretion systems through both vertical and horizontal transfer, Molecular Genetics and Genomics, vol.9, issue.5, 2015. ,
DOI : 10.1007/s00438-015-1062-2
Eat, kill or die: when amoeba meets bacteria, Current Opinion in Microbiology, vol.11, issue.3, pp.271-276, 2008. ,
DOI : 10.1016/j.mib.2008.05.005
Dictyostelium discoideum as a model system for identification of Burkholderia pseudomallei viru- Smith et al, 2011. ,
Use of a Dictyostelium Model for Isolation of Genetic Loci Associated with Phagocytosis and Virulence in Klebsiella pneumoniae, Infection and Immunity, vol.79, issue.3, pp.997-1006, 2011. ,
DOI : 10.1128/IAI.00906-10
Evolution of Pseudomonas aeruginosa virulence in infected patients revealed in a Dictyostelium discoideum host model, Clinical Microbiology and Infection, vol.17, issue.9, pp.1415-1420, 2011. ,
DOI : 10.1111/j.1469-0691.2010.03431.x
Pseudomonas aeruginosa virulence genes identified in a Dictyostelium host model, Cellular Microbiology, vol.179, issue.11, pp.729-740, 2008. ,
DOI : 10.1128/IAI.01772-05
URL : https://hal.archives-ouvertes.fr/hal-00338552
Dictyostelium discoideum: a model host to measure bacterial virulence, Nature Protocols, vol.275, issue.1, pp.25-30, 2008. ,
DOI : 10.1038/nprot.2008.212
The human pathogen Pseudomonas aeruginosa utilizes conserved virulence pathways to infect the social amoeba Dictyostelium discoideum, Proceedings of the National Academy of Sciences, vol.99, issue.5, pp.3159-3164, 2002. ,
DOI : 10.1073/pnas.052704399
The Vibrio cholerae type VI secretion system displays antimicrobial properties, Proceedings of the National Academy of Sciences, vol.107, issue.45, pp.19520-19524, 2010. ,
DOI : 10.1073/pnas.1012931107
Virulence of the Pseudomonas fluorescens clinical strain MFN1032 towards Dictyostelium discoideum and macrophages in relation with type III secretion system, BMC Microbiology, vol.12, issue.1, p.223, 2012. ,
DOI : 10.1186/1471-2180-12-223
Characterization of Two Homologous Disulfide Bond Systems Involved in Virulence Factor Biogenesis in Uropathogenic Escherichia coli CFT073, Journal of Bacteriology, vol.191, issue.12, pp.3901-390800143, 2009. ,
DOI : 10.1128/JB.00143-09
Francisella tularensis subsp. tularensis Schu S4 Disulfide Bond Formation Protein B, but Not an RND-Type Efflux Pump, Is Required for Virulence, Infection and Immunity, vol.76, issue.7, pp.3086-3092, 2008. ,
DOI : 10.1128/IAI.00363-08
Disulfide Bond Formation in the Bacterial Periplasm: Major Achievements and Challenges Ahead, Antioxidants & Redox Signaling, vol.19, issue.1, pp.63-71, 2013. ,
DOI : 10.1089/ars.2012.4864
Thioredoxin 1 Promotes Intracellular Replication and Virulence of Salmonella enterica Serovar Typhimurium, Infection and Immunity, vol.74, issue.9, pp.5140-5151, 2006. ,
DOI : 10.1128/IAI.00449-06
Rhamnolipids: Detection, Analysis, Biosynthesis, Genetic Regulation, and Bioengineering of Production, Biosurfactants: from genes to applications, pp.13-55, 2011. ,
DOI : 10.1007/978-3-642-14490-5_2
Improved antibiotic-resistance gene cassettes and omega elements for Escherichia coli vector construction and in vitro deletion/insertion mutagenesis, Gene, vol.160, issue.1, 1995. ,
DOI : 10.1016/0378-1119(95)00108-I
derivatives for insertion mutagenesis and genetic engineering in Gram-negative bacteria, Canadian Journal of Microbiology, vol.41, issue.11, pp.1053-1055, 1995. ,
DOI : 10.1139/m95-147
Rhamnolipids: diversity of structures, microbial origins and roles, Applied Microbiology and Biotechnology, vol.74, issue.13, pp.1323-1336, 2010. ,
DOI : 10.1007/s00253-010-2498-2
URL : https://hal.archives-ouvertes.fr/pasteur-00819624
Rhamnolipids Modulate Swarming Motility Patterns of Pseudomonas aeruginosa, Journal of Bacteriology, vol.187, issue.21, pp.7351-7361, 2005. ,
DOI : 10.1128/JB.187.21.7351-7361.2005
rhlA is required for the production of a novel biosurfactant promoting swarming motility in Pseudomonas aeruginosa: 3-(3-hydroxyalkanoyloxy)alkanoic acids (HAAs), the precursors of rhamnolipids, Microbiology, vol.149, issue.8, pp.2005-2013, 2003. ,
DOI : 10.1099/mic.0.26154-0
Quorum Sensing Controls Swarming Motility of Burkholderia glumae through Regulation of Rhamnolipids, PLOS ONE, vol.79, issue.1, 2015. ,
DOI : 10.1371/journal.pone.0128509.t002
URL : https://hal.archives-ouvertes.fr/pasteur-01352619
A field guide to bacterial swarming motility, Nature Reviews Microbiology, vol.33, issue.9, pp.634-644, 2010. ,
DOI : 10.1038/nrmicro2405
Genome Sequence of Pantoea ananatis LMG20103, the Causative Agent of Eucalyptus Blight and Dieback, Journal of Bacteriology, vol.192, issue.11, pp.2936-293700060, 2010. ,
DOI : 10.1128/JB.00060-10
Complete Genome Sequence of Clinical Isolate Pantoea ananatis LMG 5342, Journal of Bacteriology, vol.194, issue.6, pp.1615-161606715, 2012. ,
DOI : 10.1128/JB.06715-11
Salmonella typhimurium is pathogenic for Dictyostelium cells and subverts the starvation response, Cellular Microbiology, vol.1469, issue.11, pp.1793-1811, 2011. ,
DOI : 10.1111/j.1462-5822.2011.01662.x
Draft Genome Sequence of the Antibiotic-Producing Epiphytic Isolate Pantoea ananatis BRT175, Genome Announcements, vol.1, issue.6, pp.902-915, 2013. ,
DOI : 10.1128/genomeA.00902-13
Identification of a conserved bacterial protein secretion system in Vibrio cholerae using the Dictyostelium host model system, Proceedings of the National Academy of Sciences, vol.103, issue.5, pp.1528-1533, 2006. ,
DOI : 10.1073/pnas.0510322103
Detection and avoidance of a natural product from the pathogenic bacterium Serratia marcescens by Caenorhabditis elegans, Proceedings of the National Academy of Sciences, vol.104, issue.7, pp.2295-2300, 2007. ,
DOI : 10.1073/pnas.0610281104
URL : https://hal.archives-ouvertes.fr/hal-00165358
Quorum sensing in bacterial virulence, Microbiology, vol.156, issue.8, pp.2271-2282, 2010. ,
DOI : 10.1099/mic.0.038794-0
Roles of Pseudomonas aeruginosa las and rhl quorum-sensing systems in control of elastase and rhamnolipid biosynthesis genes., Journal of Bacteriology, vol.179, issue.18, pp.5756-5767, 1997. ,
DOI : 10.1128/jb.179.18.5756-5767.1997
Quorum sensing and bacterial pathogenicity: From molecules to disease, Journal of Laboratory Physicians, vol.3, issue.1, pp.4-11, 2011. ,
DOI : 10.4103/0974-2727.78553
Rhamnolipids Are Virulence Factors That Promote Early Infiltration of Primary Human Airway Epithelia by Pseudomonas aeruginosa, Infection and Immunity, vol.74, issue.6, pp.3134-3147, 2006. ,
DOI : 10.1128/IAI.01772-05
Rapid necrotic killing of polymorphonuclear leukocytes is caused by quorum-sensing-controlled production of rhamnolipid by Pseudomonas aeruginosa, Microbiology, vol.153, issue.5, pp.1329-1338003863, 2006. ,
DOI : 10.1099/mic.0.2006/003863-0
Structural and Functional Cellular Changes Induced by Burkholderia pseudomallei Rhamnolipid, Infection and Immunity, vol.71, issue.5, pp.2970-2975, 2003. ,
DOI : 10.1128/IAI.71.5.2970-2975.2003
Isolation, characterization, and expression in Escherichia coli of the Pseudomonas aeruginosa rhlAB genes encoding a rhamnosyltransferase involved in rhamnolipid biosurfactant synthesis, J Biol Chem, vol.269, pp.19787-19795, 1994. ,
Burkholderia thailandensis harbors two identical rhl gene clusters responsible for the biosynthesis of rhamnolipids, BMC Microbiology, vol.9, issue.1, 2009. ,
DOI : 10.1186/1471-2180-9-263
Cloning and functional characterization of the Pseudomonas aeruginosa rhlC gene that encodes rhamnosyltransferase 2, an enzyme responsible for di-rhamnolipid biosynthesis, Molecular Microbiology, vol.58, issue.3, pp.708-718, 2001. ,
DOI : 10.1046/j.1365-2958.2001.02420.x
Mass spectrometry monitoring of rhamnolipids from a growing culture of Pseudomonas aeruginosa strain 57RP, Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids, vol.1485, issue.2-3, pp.145-152, 2000. ,
DOI : 10.1016/S1388-1981(00)00039-1
Self-produced P. ananatis Grazing Resistance, pp.75-90, 2007. ,
Bacteria between protists and phages: from antipredation strategies to the evolution of pathogenicity, Molecular Microbiology, vol.64, issue.3, pp.583-589, 2007. ,
DOI : 10.1111/j.1365-2958.2007.05826.x
Off the hook ??? how bacteria survive protozoan grazing, Trends in Microbiology, vol.13, issue.7, pp.302-307, 2005. ,
DOI : 10.1016/j.tim.2005.05.009
Evolution of virulence in opportunistic pathogens: generalism, plasticity, and control, Trends in Microbiology, vol.20, issue.7, pp.336-342, 2012. ,
DOI : 10.1016/j.tim.2012.04.005
From Grazing Resistance to Pathogenesis: The Coincidental Evolution of Virulence Factors, PLoS ONE, vol.66, issue.8, 2010. ,
DOI : 10.1371/journal.pone.0011882.t002
URL : https://hal.archives-ouvertes.fr/hal-00528524
Protocols for growth and development of Dictyostelium discoideum, Nature Protocols, vol.21, issue.6, pp.1307-1316, 2007. ,
DOI : 10.1038/nprot.2007.178
Chapter 14 Biochemical and Genetic Methods in the Study of Cellular Slime Mold Development, Methods in cell physiology, pp.397-410, 1966. ,
DOI : 10.1016/S0091-679X(08)62146-9
Genetic applications of an inverse polymerase chain reaction, Genetics, vol.120, pp.621-623, 1988. ,
Pseudomonas aeruginosa biosurfactant production in continuous culture with glucose as carbon source, Appl Environ Microbiol, vol.48, pp.301-305, 1984. ,
Test: Dunn's test of multiple comparisons using rank sums. R package version 1.2.4. R Foundation for Statistical Computing ,
Liquid Chromatography/Mass Spectrometry for the Identification and Quantification of Rhamnolipids, Methods Mol Biol, vol.1149, pp.359-373978, 2014. ,
DOI : 10.1007/978-1-4939-0473-0_30
URL : https://hal.archives-ouvertes.fr/pasteur-01134344
MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0, Molecular Biology and Evolution, vol.30, issue.12, pp.2725-2729, 2013. ,
DOI : 10.1093/molbev/mst197
Growth Rates Made Easy, Molecular Biology and Evolution, vol.31, issue.1, pp.232-238, 2014. ,
DOI : 10.1093/molbev/mst187
R: a language and environment for statistical computing. R Foundation for Statistical Computing, 2014. ,
ggplot2: elegant graphics for data analysis, 2009. ,
A general system to integratelacZ fusions into the chromosomes of gram-negative eubacteria: regulation of thePm promoter of theTOL plasmid studied with all controlling elements in monocopy, Molecular and General Genetics MGG, vol.124, issue.1-2, pp.293-301, 1992. ,
DOI : 10.1007/BF00587591
One Stop Shop for Everything Dictyostelium: dictyBase and the Dicty Stock Center in 2012, Methods Mol Biol, vol.983, pp.59-92978, 2013. ,
DOI : 10.1007/978-1-62703-302-2_4