Mycobacterium tuberculosis lineage 4 comprises globally distributed and geographically restricted sublineages

Stucki David (1, 2) , Brites Daniela (2, 1) , Coscolla Mireia (2, 1) , Trauner Andrej (2, 1) , Stefan Niemann (3, 4) , Rutaihwa Liliana (2, 1) , Borrell Sonia (2, 1) , Marie Ballif (2, 1, 5) , Sebastien Gagneux (2, 1) , Jeljeli Leïla (3, 6) , Hans-Peter Beck (2, 1) , Helmi Mardassi (6) , Liu Qingyun (7) , Zhiqiang Gao (7) , Fenner Lukas (5) , Matthias Egger (5) , Tao Luo (8) , Kato-Maeda Midori (9, 10) , Thomas Jackson , Rita Macedo (11) , Moreno Milagros (12) , Tudo Griselda (13) , Fyfe Janet (14) , Globan Maria (14) , Jamieson Frances (15) , L Jennifer (15) , Asante-Poku Adwoa (16) , Manu Yeboah (16) , Wampande Eddie (17) , Ssengooba Willy (17, 18) , Moses Joloba (17) , Henry W (19) , Basu Indira (20) , James H. Bower (20) , Saraiva Margarida (21) , Sidra E. G. Vasconcellos (22) , Philip Suffys (22) , Koch Anastasia (23) , Wilkinson Robert (23, 24, 25) , Linda-Gail Bekker (23) , D Serej (26) , Bouke C de Jong (27) , Akter Suriya (27) , Kadri Toit (28) , Elisabeth Sanchez-Padilla (29) , Wangui Perpetual (30) , Maryline Bonnet (29) , Gil-Brusola Ana (31) , Matthias Frank (32) , Ntoumi Francine (32, 33) , Véronique Penlap Beng (34) , Eisenach Kathleen (35) , Alani Issam (36) , Revathi Gunturu (37) , Gehre Florian (38) , Stewart-Isherwood Lynsey (39) , Hoelscher Michael (40) , E Nyanda (41) , Rachow Andrea (40) , Daniela Maria Cirillo (42) , Skenders Girts , Sven Hoffner (43) , Bakonyte Daiva (44) , Petras Stakenas , Roland Diel (45) , Valeriu Crudu (46) , Sahal Al Hajoj (47) , Otero Larissa (48) , Francesca Barletta (48) , Jane Carter (49, 50) , Diero Lameck (50) , Philip Supply (51) , Comas Iñaki (52, 53)

1 Unibas - University of Basel
2 Swiss Tropical and Public Health Institute [Basel]
3 Forschungszentrum Borstel - Research Center Borstel
4 German Center for Infection Research, Borstel Site
5 ISPM - Institute of Social and Preventive Medicine [Bern]
6 Institut Pasteur de Tunis
7 Key Laboratory of Medical Molecular Virology of the Ministries of Education and Health
8 Laboratory of Infection and Immunity, School of Basic Medical Science, West China Center of Medical Sciences
9 University of California at San Francisco
10 School of Medicine
11 Laboratorio Nacional de Saude Publica
12 Hospital Nossa Senhora da Paz
13 Servei de Microbiologia
14 Victorian Infectious Diseases Reference Laboratory
15 Public Health Ontario - Santé publique Ontario
16 NMIMR - Noguchi Memorial Institute for Medical Research [Accra, Ghana]
17 Makerere University College of Health Sciences
18 Department of Global Health
19 Department of Molecular Biology and Microbiology
20 Lab Plus
21 ICVS/3B's—PT Government Associate Laboratory, Braga
22 Molecular Biology Applied to Mycobacteria / Biologia Molecular Aplicada a Micobactérias [Rio de Janeiro]
23 Institute of Infectious Disease and Molecular Medicine, and Department of Clinical Laboratory Sciences
24 Department of Medicine
25 Francis Crick Institute Mill Hill Laboratory, London
26 PNG-IMR - Papua New Guinea Institute of Medical Research
27 ITM - Institute of Tropical Medicine [Antwerp]
28 Tartu University Hospital United Laboratories, Mycobacteriology
29 Epicentre [Paris] [Médecins Sans Frontières]
30 Institute of Tropical Medicine and Infectious Diseases (ITROMID), Jomo Kenyatta University of Agriculture and Technology (JKUAT), Nairobi
31 Department of Microbiology
32 Eberhard Karls Universität Tübingen = Eberhard Karls University of Tuebingen
33 Fondation Congolaise pour la Recherche Médicale, Université Marien Gouabi, Brazzaville
34 University of Yaoundé [Cameroun]
35 UAMS - University of Arkansas for Medical Sciences
36 Department of Medical Laboratory Technology
37 Department of Pathology
38 Medical Research Council, Fajara
39 Right to Care and the Clinical HIV Research Unit
40 Division of Infectious Diseases and Tropical Medicine = Abteilung für infektions und tropenmedizin [Munich, Germany]
41 National Institute of Medical Research, Mbeya Medical Research Centre (NIMR-MMRC), Mbeya
42 Emerging Bacterial Pathogen Unit
43 WHO Supranational TB Reference Laboratory, Department of Microbiology
44 Department of Immunology and Cell Biology, Institute of Biotechnology
45 Institute for Epidemiology, Schleswig-Holstein University Hospital, Kiel
46 Marius Nasta Institute of Pneumology
47 Department of Infection and Immunity
48 Instituto de Medicina Tropical Alexander von Humboldt, Molecular Epidemiology Unit–Tuberculosis
49 Warren Alpert Medical School of Brown University
50 Moi University School of Medicine, Eldoret
51 CIIL - Centre d’Infection et d’Immunité de Lille - INSERM U 1019 - UMR 9017 - UMR 8204
52 IBV - Institut de Biologie Valrose
53 CIBER Epidemiology and Public Health, Madrid

Domains: Life Sciences [q-bio]

Stucki David, Brites Daniela, Coscolla Mireia, Trauner Andrej, Stefan Niemann, et al.. Mycobacterium tuberculosis lineage 4 comprises globally distributed and geographically restricted sublineages. Nature Genetics, 2016, ⟨10.1038/ng.3704⟩. ⟨pasteur-01437949⟩