Mycobacterium tuberculosis lineage 4 comprises globally distributed and geographically restricted sublineages

Stucki David 1, 2 Brites Daniela 2, 1 Coscolla Mireia 2, 1 Trauner Andrej 2, 1 Stefan Niemann 3, 4 Rutaihwa Liliana 2, 1 Borrell Sonia 2, 1 Marie Ballif 2, 1, 5 Sebastien Gagneux 2, 1 Jeljeli Leïla 3, 6 Hans-Peter Beck 2, 1 Helmi Mardassi 6 Liu Qingyun 7 Zhiqiang Gao 7 Fenner Lukas 5 Matthias Egger 5 Tao Luo 8 Kato-Maeda Midori 9, 10 Thomas Jackson Rita Macedo 11 Moreno Milagros 12 Tudo Griselda 13 Fyfe Janet 14 Globan Maria 14 Jamieson Frances 15 L Jennifer 15 Asante-Poku Adwoa 16 Manu Yeboah 16 Wampande Eddie 17 Ssengooba Willy 17, 18 Moses Joloba 17 Henry W 19 Basu Indira 20 James Bower 20 Saraiva Margarida 21 Sidra E. G. Vasconcellos 22 Philip Suffys 22 Koch Anastasia 23 Wilkinson Robert 23, 24, 25 Linda-Gail Bekker 23 D Serej 26 Bouke C de Jong 27 Akter Suriya 27 Kadri Toit 28 Elisabeth Sanchez-Padilla 29 Wangui Perpetual 30 Maryline Bonnet 29 Gil-Brusola Ana 31 Matthias Frank 32 Ntoumi Francine 32, 33 Véronique Penlap Beng 34 Eisenach Kathleen 35 Alani Issam 36 Revathi Gunturu 37 Gehre Florian 38 Stewart-Isherwood Lynsey 39 Hoelscher Michael 40 E Nyanda 41 Rachow Andrea 40 Daniela Maria Cirillo 42 Skenders Girts Sven Hoffner 43 Bakonyte Daiva 44 Petras Stakenas Roland Diel 45 Valeriu Crudu 46 Sahal Al Hajoj 47 Otero Larissa 48 Francesca Barletta 48 Jane Carter 49, 50 Diero Lameck 50 Philip Supply 51 Comas Iñaki 52, 53
1 Unibas - University of Basel
2 Swiss Tropical Institute
3 Forschungszentrum Borstel
4 German Center for Infection Research, Borstel Site
5 ISPM - Institute of Social and Preventive Medicine [Bern]
6 Institut Pasteur de Tunis
7 Key Laboratory of Medical Molecular Virology of the Ministries of Education and Health
8 Laboratory of Infection and Immunity, School of Basic Medical Science, West China Center of Medical Sciences
9 University of California at San Francisco
10 School of Medicine
11 Laboratorio Nacional de Saude Publica
12 Hospital Nossa Senhora da Paz
13 Servei de Microbiologia
14 Victorian Infectious Diseases Reference Laboratory
15 Public Health Ontario - Santé publique Ontario
16 Noguchi Memorial Institute for Medical Research
17 Makerere University College of Health Sciences
18 Department of Global Health
19 Department of Molecular Biology and Microbiology
20 Lab Plus
21 ICVS/3B's—PT Government Associate Laboratory, Braga
22 Laboratory of Molecular Biology Applied to Mycobacteria
23 Institute of Infectious Disease and Molecular Medicine, and Department of Clinical Laboratory Sciences
24 Department of Medicine
25 Francis Crick Institute Mill Hill Laboratory, London
26 PNG-IMR - Papua New Guinea Institute of Medical Research
27 ITM - Institute of Tropical Medicine [Antwerp]
28 Tartu University Hospital United Laboratories, Mycobacteriology
29 Epicentre [Paris] [Médecins Sans Frontières]
30 Institute of Tropical Medicine and Infectious Diseases (ITROMID), Jomo Kenyatta University of Agriculture and Technology (JKUAT), Nairobi
31 Department of Microbiology
32 University of Tübingen [Germany]
33 Fondation Congolaise pour la Recherche Médicale, Université Marien Gouabi, Brazzaville
34 University of Yaoundé [Cameroun]
35 UAMS - University of Arkansas for Medical Sciences
36 Department of Medical Laboratory Technology
37 Department of Pathology
38 Medical Research Council, Fajara
39 Right to Care and the Clinical HIV Research Unit
40 Division of Infectious Diseases and Tropical Medicine, Medical Center of the University of Munich (LMU)
41 National Institute of Medical Research, Mbeya Medical Research Centre (NIMR-MMRC), Mbeya
42 Emerging Bacterial Pathogen Unit
43 WHO Supranational TB Reference Laboratory, Department of Microbiology
44 Department of Immunology and Cell Biology, Institute of Biotechnology
45 Institute for Epidemiology, Schleswig-Holstein University Hospital, Kiel
46 'Marius Nasta' Pneumophtisiology Institute, Bucharest
47 Department of Infection and Immunity
48 Instituto de Medicina Tropical Alexander von Humboldt, Molecular Epidemiology Unit–Tuberculosis
IMT AvH - Instituto de Medicina Tropical "Alexander von Humboldt"
49 Warren Alpert Medical School of Brown University
50 Moi University School of Medicine, Eldoret
51 CIIL - Centre d’Infection et d’Immunité de Lille (CIIL) - U1019 - UMR 8204
52 Institute of Biomedicine of Valencia (IBV-CSIC)
53 CIBER Epidemiology and Public Health, Madrid
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https://hal-riip.archives-ouvertes.fr/pasteur-01437949
Contributor : Institut Pasteur Tunis <>
Submitted on : Tuesday, January 17, 2017 - 2:29:58 PM
Last modification on : Wednesday, September 4, 2019 - 5:18:02 PM

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Stucki David, Brites Daniela, Coscolla Mireia, Trauner Andrej, Stefan Niemann, et al.. Mycobacterium tuberculosis lineage 4 comprises globally distributed and geographically restricted sublineages. Nature Genetics, Nature Publishing Group, 2016, ⟨10.1038/ng.3704 ⟩. ⟨pasteur-01437949⟩

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