New species of Siphonaptera from Egypt and the Soudan, Entomol Mon Mag, vol.39, pp.83-90, 1903. ,
Rodent reservoirs and flea vectors of natural foci of plague In: WHO Division of communicable diseases Plague manual: epidemiology, distribution, surveillance and control World Health Organization, pp.63-96, 1999. ,
), Journal of the Royal Society of New Zealand, vol.18, issue.2, pp.143-232, 1979. ,
DOI : 10.5962/bhl.title.28093
Contribution à un catalogue des puces de Madagascar (Insecta, Siphonaptera), Arch Inst Pasteur Madagascar, vol.59, pp.57-98, 1991. ,
DOI : 10.5962/bhl.part.79755
URL : http://doi.org/10.5962/bhl.part.79755
Données faunistiques et écologiques sur les puces de Madagascar (Siphonaptera), Cah ORSTOM Sér Entomol Méd Parasitol, vol.4, issue.8, pp.31-60, 1966. ,
Fleas and flea-borne diseases, International Journal of Infectious Diseases, vol.14, issue.8, pp.667-76, 2010. ,
DOI : 10.1016/j.ijid.2009.11.011
URL : https://doi.org/10.1016/j.ijid.2009.11.011
Transmission of Flea-Borne Zoonotic Agents, Annual Review of Entomology, vol.57, issue.1, pp.61-82, 2012. ,
DOI : 10.1146/annurev-ento-120710-100717
Early-Phase Transmission of <I>Yersinia pestis</I> by Unblocked <I>Xenopsylla cheopis</I> (Siphonaptera: Pulicidae) Is as Efficient as Transmission by Blocked Fleas, Journal of Medical Entomology, vol.44, issue.4, pp.678-82, 2007. ,
DOI : 10.1603/0022-2585(2007)44[678:ETOYPB]2.0.CO;2
Plague in Madagascar: overview of the 2014?2015 epidemic season, Week Epidemiol Rec, vol.90, issue.20, pp.250-252, 2015. ,
Plague around the world, Week Epidemiol Rec, vol.91, issue.8, pp.2010-201589, 2016. ,
Epidemiologie de la peste à Madagascar, Arch Inst Pasteur Madagascar, vol.35, pp.9-147, 1966. ,
Yersinia pestis genome sequencing identifies patterns of global phylogenetic diversity, Nature Genetics, vol.17, issue.12, pp.1140-1143, 2010. ,
DOI : 10.1128/JB.01786-08
URL : https://hal.archives-ouvertes.fr/pasteur-00836130
Current epidemiology of human plague in Madagascar, Microbes and Infection, vol.2, issue.1, pp.25-31, 2000. ,
DOI : 10.1016/S1286-4579(00)00289-6
Understanding the Persistence of Plague Foci in Madagascar, PLoS Neglected Tropical Diseases, vol.5, issue.11, pp.1-8, 2013. ,
DOI : 10.1371/journal.pntd.0002382.t001
URL : https://hal.archives-ouvertes.fr/pasteur-00946701
Résurgence de la peste dans le district d'Ikongo à Madagascar en 1998. 2. Réservoirs et vecteurs impliqués, Bull Soc Pathol Exot, vol.94, issue.2, pp.119-141, 2001. ,
Résurgence de la peste dans le District d'Ikongo à Madagascar en 1998. 1. Aspects épidémiologiques dans la population humaine, Bull Soc Pathol Exot, vol.94, issue.2, pp.115-123, 2001. ,
Pneumonic Plague Outbreak, Northern Madagascar, 2011, Emerging Infectious Diseases, vol.21, issue.1, pp.8-15, 2011. ,
DOI : 10.3201/eid2101.131828
URL : https://hal.archives-ouvertes.fr/hal-01300528
and Evaluation of the Plague Dispersion in Madagascar, Vector-Borne and Zoonotic Diseases, vol.10, issue.1, pp.77-84, 2010. ,
DOI : 10.1089/vbz.2009.0019
URL : https://hal.archives-ouvertes.fr/pasteur-00836185
Diversité des puces vectrices en fonction des foyers pesteux, Bull Soc Pathol Exot. Bis, vol.92, pp.419-440, 1999. ,
Transmission expérimentale de la peste par Synopsyllus fonquerniei de Madagascar, C R hebdomadaires Sci Acad Sci Série D: Sci Nat, vol.264, issue.4, pp.681-683, 1967. ,
The rodent problem in Madagascar: agricultural pest and threat to human health Ecologically-based rodent management. Canberra: ACIAR publications, pp.441-59, 1999. ,
From the recent lessons of the Malagasy foci
towards a global understanding of the factors involved in plague reemergence, Veterinary Research, vol.36, issue.3, pp.437-53, 2005. ,
DOI : 10.1051/vetres:2005007
URL : https://hal.archives-ouvertes.fr/hal-00902976
in Madagascar, Molecular Ecology, vol.38, issue.16, pp.4153-67, 2014. ,
DOI : 10.2307/2408641
URL : https://hal.archives-ouvertes.fr/pasteur-00836576
Phylogeography and Molecular Epidemiology of Yersinia pestis in Madagascar, PLoS Neglected Tropical Diseases, vol.7, issue.9, p.1319, 2011. ,
DOI : 10.1371/journal.pntd.0001319.s003
URL : https://hal.archives-ouvertes.fr/pasteur-00836603
Host location, survival and fecundity of the Oriental rat flea Xenopsylla cheopis (Siphonaptera: Pulicidae) in relation to black rat Rattus rattus (Rodentia: Muridae) host age and sex, Bulletin of Entomological Research, vol.16, issue.05, pp.375-84, 2002. ,
DOI : 10.2307/3275037
Xenopsylla cheopis (Siphonaptera: Pulicidae) Susceptibility to Deltamethrin in Madagascar, PLoS ONE, vol.40, issue.11, p.111998, 2014. ,
DOI : 10.1371/journal.pone.0111998.t003
URL : https://doi.org/10.1371/journal.pone.0111998
Xenopsylla cheopis (Siphonaptera: Xenopsyllinae), puces des foyers ruraux de peste des Hautes Terres malgaches: niveau de sensibilité au DDT, aux pyréthrinoïdes et aux carbamates après 50 années de lutte chimique, Arch Inst Pasteur Madagascar, vol.66, pp.9-12, 2000. ,
Histological effects of fenoxycarb on the oriental rat flea, Xenopsylla cheopis (Siphonaptera: Pulicidae), Acta Entomol Sin, vol.51, issue.5, pp.504-512, 2008. ,
Population genetic structure of the prairie dog flea and plague vector, Oropsylla hirsuta, Parasitology, vol.42, issue.01, pp.71-80, 2011. ,
DOI : 10.1046/j.0300-3256.2001.00095.x
The absence of concordant population genetic structure in the black-tailed prairie dog and the flea, Oropsylla hirsuta, with implications for the spread of Yersinia pestis, Molecular Ecology, vol.129, issue.10, pp.2038-2087, 2010. ,
DOI : 10.7589/0090-3558-24.3.399
Speciation in parasites: a population genetics approach, Trends in Parasitology, vol.21, issue.10, pp.469-75, 2005. ,
DOI : 10.1016/j.pt.2005.08.009
URL : https://hal.archives-ouvertes.fr/hal-00104483
Biogeography and host-related factors trump parasite life history: limited congruence among the genetic structures of specific ectoparasitic lice and their rodent hosts, Molecular Ecology, vol.292, issue.20, pp.5185-204, 2013. ,
DOI : 10.1126/science.1059412
Comparative phylogeography between two generalist flea species reveal a complex interaction between parasite life history and host vicariance: parasite-host association matters, BMC Evolutionary Biology, vol.53, issue.1, p.105, 2015. ,
DOI : 10.1080/10635150490423692
Comparative phylogeography of the plateau zokor (Eospalax baileyi) and its host-associated flea (Neopsylla paranoma) in the Qinghai-Tibet Plateau, BMC Evolutionary Biology, vol.28, issue.2, pp.2-9, 2014. ,
DOI : 10.1093/molbev/msr121
First Isolation and Direct Evidence for the Existence of Large Small-Mammal Reservoirs of Leptospira sp. in Madagascar, PLoS ONE, vol.5, issue.11, p.14111, 2010. ,
DOI : 10.1371/journal.pone.0014111.s001
URL : https://hal.archives-ouvertes.fr/pasteur-00836191
Brief communication. Isolation of microsatellite loci from a social lizard, Egernia stokesii, using a modified enrichment procedure, Journal of Heredity, vol.90, issue.2, pp.301-305, 1999. ,
DOI : 10.1093/jhered/90.2.301
A panel of microsatellite loci for the Southern Damselfly, Coenagrion mercuriale (Odonata: Coenagrionidae), Conservation Genetics, vol.5, issue.1, pp.117-126, 2004. ,
DOI : 10.1023/B:COGE.0000014057.76323.82
genepop???007: a complete re-implementation of the genepop software for Windows and Linux, Molecular Ecology Resources, vol.145, issue.1, pp.103-109, 2008. ,
DOI : 10.2307/2408641
URL : https://hal.archives-ouvertes.fr/halsde-00366752
Estimating F-statistics for the analysis of population structure, Evolution, vol.38, issue.6, pp.1358-70, 1984. ,
micro-checker: software for identifying and correcting genotyping errors in microsatellite data, Molecular Ecology Notes, vol.8, issue.3, pp.535-543, 2004. ,
DOI : 10.1046/j.1365-294x.1998.00477.x
Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows, Molecular Ecology Resources, vol.127, issue.3, pp.564-571, 2010. ,
DOI : 10.1111/j.1755-0998.2010.02847.x
Microsatellite Null Alleles and Estimation of Population Differentiation, Molecular Biology and Evolution, vol.24, issue.3, pp.621-652, 2007. ,
DOI : 10.1093/molbev/msl191
Inference of population structure using multilocus genotype data, Genetics, vol.155, issue.2, pp.945-59, 2000. ,
Discriminant analysis of principal components: a new method for the analysis of genetically structured populations, BMC Genetics, vol.11, issue.1, p.94, 2010. ,
DOI : 10.1186/1471-2156-11-94
URL : https://hal.archives-ouvertes.fr/hal-00539267
STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method, Conservation Genetics Resources, vol.10, issue.2, pp.359-61, 2012. ,
DOI : 10.1007/s10592-008-9622-1
Detecting the number of clusters of individuals using the software structure: a simulation study, Molecular Ecology, vol.16, issue.8, pp.2611-2631, 2005. ,
DOI : 10.1098/rspb.2001.1600
CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure, Bioinformatics, vol.23, issue.14, pp.1801-1807, 2007. ,
DOI : 10.1093/bioinformatics/btm233
distruct: a program for the graphical display of population structure, Molecular Ecology Notes, vol.298, issue.1, pp.137-145, 2004. ,
DOI : 10.1046/j.1471-8286.2003.00566.x
adegenet: a R package for the multivariate analysis of genetic markers, Bioinformatics, vol.24, issue.11, pp.1403-1408, 2008. ,
DOI : 10.1093/bioinformatics/btn129
URL : https://hal.archives-ouvertes.fr/hal-00428105
R: A language and environment for statistical computing. R Foundation for Statistical Computing, 2008. ,
DIYABC v2.0: a software to make approximate Bayesian computation inferences about population history using single nucleotide polymorphism, DNA sequence and microsatellite data, Bioinformatics, vol.30, issue.8, pp.1187-1196, 2014. ,
DOI : 10.1093/bioinformatics/btt763
URL : https://hal.archives-ouvertes.fr/hal-01337243
Précis d'entomologie médicale et vétérinaire. Paris: Maloine, 1985. ,
Effect of temperature and relative humidity on the development times and survival of Synopsyllus fonquerniei and Xenopsylla cheopis, the flea vectors of plague in Madagascar, Parasites & Vectors, vol.7, issue.11, pp.2-10, 2016. ,
DOI : 10.1371/journal.pntd.0002382
Inference on population history and model checking using DNA sequence and microsatellite data with the software DIYABC (v1.0), BMC Bioinformatics, vol.11, issue.1, p.401, 2010. ,
DOI : 10.1186/1471-2105-11-401
Inferring population history with DIY ABC: a user-friendly approach to approximate Bayesian computation, Bioinformatics, vol.24, issue.23, pp.2713-2722, 2008. ,
DOI : 10.1093/bioinformatics/btn514
package for the estimation and exploration of population genetics parameters and their associated errors, Methods in Ecology and Evolution, vol.12, issue.8, pp.782-790, 2013. ,
DOI : 10.1111/j.1755-0998.2012.03174.x
and its relatives do not measure differentiation, Molecular Ecology, vol.15, issue.18, pp.4015-4041, 2008. ,
DOI : 10.1111/j.1469-1809.1949.tb02451.x
Directional genetic differentiation and relative migration, Ecology and Evolution, vol.15, issue.11, pp.3461-75, 2016. ,
DOI : 10.1038/sj.hdy.6884960
URL : http://onlinelibrary.wiley.com/doi/10.1002/ece3.2096/pdf
Plague Circulation and Population Genetics of the Reservoir Rattus rattus: The Influence of Topographic Relief on the Distribution of the Disease within the Madagascan Focus, PLoS Neglected Tropical Diseases, vol.7, issue.6, p.2266, 2013. ,
DOI : 10.1371/journal.pntd.0002266.t002
URL : https://hal.archives-ouvertes.fr/pasteur-00835065
Cryptic population genetic structure: the number of inferred clusters depends on sample size, Molecular Ecology Resources, vol.3, issue.2, pp.314-337, 2010. ,
DOI : 10.1111/j.1365-294X.2007.03615.x
Empirical evaluation of genetic clustering methods using multilocus genotypes from 20 chicken breeds, Genetics, vol.159, issue.2, pp.699-713, 2001. ,
in the western Indian Ocean, with special emphasis on the colonization history of Madagascar, Journal of Biogeography, vol.17, issue.3, pp.398-410, 2010. ,
DOI : 10.1093/oxfordjournals.molbev.a040192
URL : https://hal.archives-ouvertes.fr/halsde-00459761
A Decade of Plague in Mahajanga, Madagascar: Insights into the Global Maritime Spread of Pandemic Plague, mBio, vol.4, issue.1, p.623, 2013. ,
DOI : 10.1128/mBio.00623-12
The population genetic structure of vectors and our understanding of disease epidemiology, Parasite, vol.15, issue.3, pp.444-452, 2008. ,
DOI : 10.1051/parasite/2008153444
Population genetic structure of the dengue mosquito Aedes aegypti in Venezuela, Mem??rias do Instituto Oswaldo Cruz, vol.65, issue.6, pp.625-658, 2006. ,
DOI : 10.4269/ajtmh.2001.65.491
Variation over space and time of Aedes aegypti in Phnom Penh (Cambodia): genetic structure and oral susceptibility to a dengue virus, Genetical Research, vol.82, issue.3, pp.171-82, 2003. ,
DOI : 10.1017/S0016672303006463
Aedes aegypti in Ho Chi Minh City (Viet Nam): susceptibility to dengue 2 virus and genetic differentiation, Transactions of the Royal Society of Tropical Medicine and Hygiene, vol.93, issue.6, pp.581-587, 1999. ,
DOI : 10.1016/S0035-9203(99)90056-1